Epidermal growth factor receptor

Site	Peptide	Modification	Experiment
K37	VCQGTSNkLTQLGTF	Sumoylation	PhosphositePlus November 2016
N56	LSLQRMFnNCEVVLG	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
N73	EITYVQRnYDLSFLK	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites UniProtKB CARBOHYD
S77	VQRNYDLsFLKTIQE	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016
R98	IALNTVErIPLENLQ	None	dbSNP All mutations All human mutations
Y112	QIIRGNMyYENSYAL	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y113	IIRGNMYyENSYALA	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y117	NMYYENSyALAVLSN	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
N128	VLSNYDAnKTGLKEL	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
K133	DANKTGLkELPMRNL	N6-acetyllysine	Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test PhosphoSite Plus Datasets Combined January 10, 2014
S151	LHGAVRFsNNPALCN	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
N175	VSSDFLSnMSMDFQN	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
C190	HLGSCQKcDPSCPNG	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
N196	KCDPSCPnGSCWGAG	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
R222	CAQQCSGrCRGKSPS	Dimethylation	PhosphositePlus November 2016
R224	QQCSGRCrGKSPSDC	Dimethylation	PhosphositePlus November 2016
S229	RCRGKSPsDCCHNQC	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES
P266	TCKDTCPpLMLYNPT	None	dbSNP All mutations All human mutations
Y270	TCPPLMLyNPTTYQM	Phosphotyrosine	Phosphosite, September 2009 B Phosphosite, September 2009 March 24 Phosphosite, September 2009
K284	MDVNPEGkYSFGATC	N6-acetyllysine	Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test PhosphoSite Plus Datasets Combined January 10, 2014
T290	GKYSFGAtCVKKCPR	Phosphothreonine	PhosphositePlus November 2016 HPRD: Human Protein Reference Database Curated Modifications dbPTM 3.0 experimentally verified PTM sites
C291	KYSFGATcVKKCPRN	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
C311	HGSCVRAcGADSYEM	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
Y316	RACGADSyEMEEDGV	Phosphotyrosine	Phosphosite, September 2009 B Phosphosite, September 2009 March 24 Phosphosite, September 2009
C329	GVRKCKKcEGPCRKV	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
K346	GIGIGEFkDSLSINA	N6-acetyllysine	Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test PhosphoSite Plus Datasets Combined January 10, 2014
N352	FKDSLSInATNIKHF	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
T354	DSLSINAtNIKHFKN	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels
N361	TNIKHFKnCTSISGD	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
N413	LIQAWPEnRTDLHAF	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
N444	SLAVVSLnITSLGLR	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
S457	LRSLKEIsDGDVIIS	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphositePlus November 2016
C470	ISGNKNLcYANTINW	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
S511	QVCHALCsPEGCWGP	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
R521	GCWGPEPrDCVSCRN	None	dbSNP All mutations All human mutations
N528	RDCVSCRnVSRGREC	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
N568	ECLPQAMnITCTGRG	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
Y585	NCIQCAHyIDGPHCV	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
N603	PAGVMGEnNTLVWKY	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
N623	VCHLCHPnCTYGCTG	N-Glycosylation	UniProtKB CARBOHYD HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites
S645	TNGPKIPsIATGMVG	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
T648	PKIPSIAtGMVGALL	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
V674	FMRRRHIvRKRTLRR	None	dbSNP All mutations All human mutations
T678	RHIVRKRtLRRLLQE	Phosphothreonine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES Phosphosite, September 2009 March 24 Phosphosite, September 2009
T693	RELVEPLtPSGEAPN	Phosphothreonine	Flpin_EGFR Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites TCGA PNNL: Ovarian phosphoproteomic data UniProtKB - MOD_RES [Only sites that respond to ischemia] Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels UniProtKB - MOD_RES UniProtKB - MOD_RES System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation UniProtKB - MOD_RES Flpin_EGFR Flpin_EGFR_repC Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 DLDsti Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels test UniprotKB - MOD_RES Phosphosite, September 2009
S695	LVEPLTPsGEAPNQA	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES Phosphosite, September 2009 March 24 Phosphosite, September 2009
K708	QALLRILkETEFKKI	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
E709	ALLRILKeTEFKKIK	None	dbSNP All mutations All human mutations
K713	ILKETEFkKIKVLGS	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
K714	LKETEFKkIKVLGSG	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
K716	ETEFKKIkVLGSGAF	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
G719	FKKIKVLgSGAFGTV	None	Pathogenic SNPs All human mutations dbSNP All mutations Test Set 3 dbSNP pathogenic, from dev server Pathogenic mutations
S720	KKIKVLGsGAFGTVY	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
G724	VLGSGAFgTVYKGLW	None	dbSNP All mutations All human mutations
T725	LGSGAFGtVYKGLWI	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y727	SGAFGTVyKGLWIPE	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite Plus Datasets Combined July 3, 2013 HPRD: Human Protein Reference Database Curated Modifications Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines PhosphoSite, May 2007 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y727	SGAFGTVyKGLWIPE	None	Tinti All Peptides
K728	GAFGTVYkGLWIPEG	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
K728	GAFGTVYkGLWIPEG	None	Bruce lab interactions retry with sites Bruce Lab interactions with lower case Bruce Lab interactions - sites
E734	YKGLWIPeGEKVKIP	None	dbSNP All mutations All human mutations
K737	LWIPEGEkVKIPVAI	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
K739	IPEGEKVkIPVAIKE	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
K739	IPEGEKVkIPVAIKE	None	Bruce lab interactions retry with sites Bruce Lab interactions with lower case Bruce Lab interactions - sites
L747	IPVAIKElREATSPK	None	dbSNP All mutations All human mutations
R748	PVAIKELrEATSPKA	None	dbSNP All mutations All human mutations
S752	KELREATsPKANKEI	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
K754	LREATSPkANKEILD	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
K757	ATSPKANkEILDEAY	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y764	KEILDEAyVMASVDN	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite, May 2007 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
S768	DEAYVMAsVDNPHVC	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite, May 2007 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
S768	DEAYVMAsVDNPHVC	None	Pathogenic SNPs All human mutations dbSNP All mutations Test Set 3 dbSNP pathogenic, from dev server Pathogenic mutations
V769	EAYVMASvDNPHVCR	None	dbSNP All mutations All human mutations
Q787	ICLTSTVqLITQLMP	None	dbSNP All mutations All human mutations
T790	TSTVQLItQLMPFGC	None	dbSNP All mutations All human mutations
Y801	PFGCLLDyVREHKDN	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
K823	NWCVQIAkGMNYLED	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y827	QIAKGMNyLEDRRLV	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
L833	NYLEDRRlVHRDLAA	None	dbSNP All mutations All human mutations
V834	YLEDRRLvHRDLAAR	None	dbSNP All mutations All human mutations
H835	LEDRRLVhRDLAARN	None	dbSNP All mutations All human mutations
L838	RRLVHRDlAARNVLV	None	dbSNP All mutations All human mutations
K846	AARNVLVkTPQHVKI	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
L858	VKITDFGlAKLLGAE	None	dbSNP All mutations All human mutations
K860	ITDFGLAkLLGAEEK	Ubiquitination	PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
L861	TDFGLAKlLGAEEKE	None	dbSNP All mutations All human mutations
K867	KLLGAEEkEYHAEGG	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y869	LGAEEKEyHAEGGKV	Phosphotyrosine	Flpin_EGFR [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 test PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES Flpin_EGFR Flpin_EGFR_repC Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 2016 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines PhosphoSite, May 2007 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 Wolf-Yadlin HPRD: Human Protein Reference Database Curated Modifications Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Phosphosite, September 2009 March 24
Y869	LGAEEKEyHAEGGKV	None	Tinti All Peptides
G873	EKEYHAEgGKVPIKW	None	dbSNP All mutations All human mutations
K875	EYHAEGGkVPIKWMA	Ubiquitination	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets, January 9, 2015
Y891	ESILHRIyTHQSDVW	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016
T892	SILHRIYtHQSDVWS	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphositePlus November 2016
K913	ELMTFGSkPYDGIPA	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y915	MTFGSKPyDGIPASE	Phosphotyrosine	HPRD: Human Protein Reference Database Curated Modifications dbPTM 3.0 experimentally verified PTM sites Phospho.ELM v9.0
K929	EISSILEkGERLPQP	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
T940	LPQPPICtIDVYMIM	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y944	PICTIDVyMIMVKCW	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite, May 2007 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
K960	IDADSRPkFRELIIE	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
R962	ADSRPKFrELIIEFS	None	dbSNP All mutations All human mutations
K970	ELIIEFSkMARDPQR	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y978	MARDPQRyLVIQGDE	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite, May 2007 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
Y978	MARDPQRyLVIQGDE	None	Tinti All Peptides
H988	IQGDERMhLPSPTDS	None	dbSNP All mutations All human mutations
S991	DERMHLPsPTDSNFY	Phosphoserine	Flpin_EGFR Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks TCGA PNNL: Ovarian phosphoproteomic data UniProtKB - MOD_RES UniProtKB - MOD_RES [Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES UniProtKB - MOD_RES Flpin_EGFR Flpin_EGFR_repC Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Phosphosite, September 2009 March 24 UniProtKB - MOD_RES PhosphoSite, May 2007 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 Wolf-Yadlin HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 DLDsti UniprotKB - MOD_RES test Phosphosite, September 2009
T993	RMHLPSPtDSNFYRA	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
S995	HLPSPTDsNFYRALM	Phosphoserine	Flpin_EGFR Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES Flpin_EGFR Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES test Phosphosite, September 2009
Y998	SPTDSNFyRALMDEE	Phosphotyrosine	Flpin_EGFR [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES UniProtKB - MOD_RES [Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES UniProtKB - MOD_RES Flpin_EGFR Flpin_EGFR_repC Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Phosphosite, September 2009 March 24 UniProtKB - MOD_RES Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines PhosphoSite, May 2007 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 Wolf-Yadlin HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES test Phosphosite, September 2009
Y1016	DVVDADEyLIPQQGF	Phosphotyrosine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES Phosphosite, September 2009 March 24 Phosphosite, September 2009
Y1016	DVVDADEyLIPQQGF	None	Tinti All Peptides
S1025	IPQQGFFsSPSTSRT	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
S1026	PQQGFFSsPSTSRTP	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES Phosphosite, September 2009 March 24 Phosphosite, September 2009
S1028	QGFFSSPsTSRTPLL	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder HPRD: Human Protein Reference Database Curated Modifications Phospho.ELM v9.0 Phosphosite, September 2009 March 24 Phosphosite, September 2009
S1030	FFSSPSTsRTPLLSS	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
T1032	SSPSTSRtPLLSSLS	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016
L1034	PSTSRTPlLSSLSAT	None	dbSNP All mutations All human mutations
S1036	TSRTPLLsSLSATSN	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite, September 2009 March 24 Phosphosite, September 2009
S1037	SRTPLLSsLSATSNN	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
S1039	TPLLSSLsATSNNST	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES Phosphosite, September 2009 March 24 Phosphosite, September 2009
T1041	LLSSLSAtSNNSTVA	Phosphothreonine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES Phosphosite, September 2009 March 24 Phosphosite, September 2009
S1042	LSSLSATsNNSTVAC	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Phosphosite, September 2009 March 24 UniprotKB - MOD_RES Phosphosite, September 2009
S1045	LSATSNNsTVACIDR	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
T1046	SATSNNStVACIDRN	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
S1057	IDRNGLQsCPIKEDS	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 TCGA PNNL: Ovarian phosphoproteomic data Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
K1061	GLQSCPIkEDSFLQR	Ubiquitination	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets, January 9, 2015
K1061	GLQSCPIkEDSFLQR	N6-acetyllysine	PhosphositePlus November 2016 acK test
S1064	SCPIKEDsFLQRYSS	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites TCGA PNNL: Ovarian phosphoproteomic data UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Phosphosite, September 2009 March 24 UniprotKB - MOD_RES Phosphosite, September 2009
Y1069	EDSFLQRySSDPTGA	Phosphotyrosine	Flpin_EGFR [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules PhosphositePlus November 2016 [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES UniProtKB - MOD_RES [Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES Flpin_EGFR Flpin_EGFR_repC [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules Flpin_EGFR_repB [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Phosphosite, September 2009 March 24 Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines PhosphoSite, May 2007 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 Wolf-Yadlin HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES test Phosphosite, September 2009
Y1069	EDSFLQRySSDPTGA	None	Tinti All Peptides
S1070	DSFLQRYsSDPTGAL	Phosphoserine	Flpin_EGFR Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES Flpin_EGFR_repC Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 Wolf-Yadlin HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES test Phosphosite, September 2009
S1071	SFLQRYSsDPTGALT	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES Phosphosite, September 2009 March 24 Phosphosite, September 2009
T1074	QRYSSDPtGALTEDS	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
T1078	SDPTGALtEDSIDDT	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets, January 9, 2015 HPRD: Human Protein Reference Database Curated Modifications Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 Phosphosite, September 2009
S1081	TGALTEDsIDDTFLP	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Phosphosite, September 2009 March 24 UniprotKB - MOD_RES Phosphosite, September 2009
T1085	TEDSIDDtFLPVPEY	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
Y1092	TFLPVPEyINQSVPK	Phosphotyrosine	Flpin_EGFR [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules Flpin_EGFR_repB [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 [Default Assignments] Effects of HER2 overexpression on cell signaling networks governing proliferation and migration Phosphosite, September 2009 March 24 [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer UniProtKB - MOD_RES Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Effects of HER2 overexpression on cell signaling networks governing proliferation and migration Phosphosite Plus Datasets Combined December 3, 2012 Wolf-Yadlin HPRD: Human Protein Reference Database Curated Modifications Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer UniprotKB - MOD_RES test Phosphosite, September 2009
Y1092	TFLPVPEyINQSVPK	None	Tinti All Peptides Test for Protocols Paper
S1096	VPEYINQsVPKRPAG	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
S1104	VPKRPAGsVQNPVYH	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y1110	GSVQNPVyHNQPLNP	Phosphotyrosine	Flpin_EGFR [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES LIMSt UniProtKB - MOD_RES Flpin_EGFR Flpin_EGFR_repC limST Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines PhosphoSite, May 2007 UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB - MOD_RES test Phosphosite, September 2009
Y1110	GSVQNPVyHNQPLNP	None	Tinti All Peptides Roman_set1
S1120	QPLNPAPsRDPHYQD	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y1125	APSRDPHyQDPHSTA	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite, May 2007 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
Y1125	APSRDPHyQDPHSTA	None	Tinti All Peptides
S1130	PHYQDPHsTAVGNPE	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
T1131	HYQDPHStAVGNPEY	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
Y1138	TAVGNPEyLNTVQPT	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases UniProtKB - MOD_RES PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite, May 2007 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
Y1138	TAVGNPEyLNTVQPT	None	Tinti All Peptides Roman_set1
T1141	GNPEYLNtVQPTCVN	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
T1145	YLNTVQPtCVNSTFD	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
T1150	QPTCVNStFDSPAHW	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
S1153	CVNSTFDsPAHWAQK	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014
S1162	AHWAQKGsHQISLDN	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
S1166	QKGSHQIsLDNPDYQ	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks TCGA PNNL: Ovarian phosphoproteomic data UniProtKB - MOD_RES [Only sites that respond to ischemia] Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels UniProtKB - MOD_RES [Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer UniProtKB - MOD_RES PhosphoSite, May 2007 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB KMN PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined December 3, 2012 HPRD: Human Protein Reference Database Curated Modifications UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Phosphosite, September 2009 March 24 UniprotKB - MOD_RES Phosphosite, September 2009
Y1172	ISLDNPDyQQDFFPK	Phosphotyrosine	Flpin_EGFR [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks TCGA PNNL: Ovarian phosphoproteomic data UniProtKB - MOD_RES UniProtKB - MOD_RES [Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES GI lookup SUPP T1-27 UniProtKB - MOD_RES Flpin_EGFR Flpin_EGFR_repC [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules Flpin_EGFR_repB [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks [Default Assignments] Effects of HER2 overexpression on cell signaling networks governing proliferation and migration Phosphosite, September 2009 March 24 [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer UniProtKB - MOD_RES Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines PhosphoSite, May 2007 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks TCGA PNNL: Ovarian phosphoproteomic data phosphotyrosine subset UniProtKB KMN Waziri GBM Samples PhosphoSite Plus Datasets Combined January 10, 2014 Effects of HER2 overexpression on cell signaling networks governing proliferation and migration Phosphosite Plus Datasets Combined December 3, 2012 Wolf-Yadlin HPRD: Human Protein Reference Database Curated Modifications Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels test UniprotKB - MOD_RES Phosphosite, September 2009
Y1172	ISLDNPDyQQDFFPK	None	Tinti All Peptides Roman_set1 Test for Protocols Paper
K1179	YQQDFFPkEAKPNGI	N6-acetyllysine	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test PhosphoSite Plus Datasets Combined January 10, 2014
K1182	DFFPKEAkPNGIFKG	N6-acetyllysine	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test PhosphoSite Plus Datasets Combined January 10, 2014
K1188	AKPNGIFkGSTAENA	N6-acetyllysine	dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test PhosphoSite Plus Datasets Combined January 10, 2014
K1188	AKPNGIFkGSTAENA	Methylation	PhosphositePlus November 2016
S1190	PNGIFKGsTAENAEY	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 B Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphoSite, May 2007 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
T1191	NGIFKGStAENAEYL	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 dbPTM 3.0 experimentally verified PTM sites Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 Phosphosite, September 2009 B Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 Phosphosite, September 2009 March 24 PhosphositePlus November 2016 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009
Y1197	STAENAEyLRVAPQS	Phosphotyrosine	Flpin_EGFR [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified Phosphosite Plus Datasets Combined July 3, 2013 PhosphoSite Plus Datasets, January 9, 2015 Guolin_H4006ER PhosphositePlus November 2016 Proteogenomics connects somatic mutations to signalling in breast cancer [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined July 11, 2014 dbPTM 3.0 experimentally verified PTM sites [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES UniProtKB - MOD_RES [Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES UniProtKB - MOD_RES Flpin_EGFR Flpin_EGFR_repC Flpin_EGFR_repB PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES Phosphosite, September 2009 B Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniprotKB MOD_RES Dec. 16, 2016 Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks [Default Assignments] Effects of HER2 overexpression on cell signaling networks governing proliferation and migration Phosphosite, September 2009 March 24 [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer UniProtKB - MOD_RES Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines PhosphoSite, May 2007 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB KMN Waziri GBM Samples PhosphoSite Plus Datasets Combined January 10, 2014 Effects of HER2 overexpression on cell signaling networks governing proliferation and migration Phosphosite Plus Datasets Combined December 3, 2012 Wolf-Yadlin HPRD: Human Protein Reference Database Curated Modifications Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases UniProtKB - MOD_RES Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels test UniprotKB - MOD_RES Phosphosite, September 2009
Y1197	STAENAEyLRVAPQS	None	Tinti All Peptides Test for Protocols Paper
R1199	AENAEYLrVAPQSSE	Omega-N-methylated arginine	UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES
R1199	AENAEYLrVAPQSSE	Omega-N-methylarginine	dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniprotKB MOD_RES Dec. 16, 2016 UniProtKB - MOD_RES UniprotKB - MOD_RES UniProtKB KMN
A1210	QSSEFIGa	None	dbSNP All mutations All human mutations