Epidermal growth factor receptor

Site	Peptide	Modification	Experiment
K37	VCQGTSNkLTQLGTF	Sumoylation	PhosphositePlus November 2016
N56	LSLQRMFnNCEVVLG	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
N73	EITYVQRnYDLSFLK	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites UniProtKB CARBOHYD
S77	VQRNYDLsFLKTIQE	Phosphoserine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015
R98	IALNTVErIPLENLQ	None	dbSNP All mutations All human mutations
Y112	QIIRGNMyYENSYAL	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
Y113	IIRGNMYyENSYALA	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
Y117	NMYYENSyALAVLSN	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
N128	VLSNYDAnKTGLKEL	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
K133	DANKTGLkELPMRNL	N6-acetyllysine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
S151	LHGAVRFsNNPALCN	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
N175	VSSDFLSnMSMDFQN	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
C190	HLGSCQKcDPSCPNG	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
N196	KCDPSCPnGSCWGAG	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
R222	CAQQCSGrCRGKSPS	Dimethylation	PhosphositePlus November 2016
R224	QQCSGRCrGKSPSDC	Dimethylation	PhosphositePlus November 2016
S229	RCRGKSPsDCCHNQC	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 UniProtKB - MOD_RES UniProtKB KMN PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 UniprotKB - MOD_RES
P266	TCKDTCPpLMLYNPT	None	dbSNP All mutations All human mutations
Y270	TCPPLMLyNPTTYQM	Phosphotyrosine	Phosphosite, September 2009 Phosphosite, September 2009 March 24 Phosphosite, September 2009 B
K284	MDVNPEGkYSFGATC	N6-acetyllysine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
T290	GKYSFGAtCVKKCPR	Phosphothreonine	dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications PhosphositePlus November 2016
C291	KYSFGATcVKKCPRN	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
C311	HGSCVRAcGADSYEM	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
Y316	RACGADSyEMEEDGV	Phosphotyrosine	Phosphosite, September 2009 Phosphosite, September 2009 March 24 Phosphosite, September 2009 B
C329	GVRKCKKcEGPCRKV	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
K346	GIGIGEFkDSLSINA	N6-acetyllysine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
N352	FKDSLSInATNIKHF	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
T354	DSLSINAtNIKHFKN	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels
N361	TNIKHFKnCTSISGD	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
N413	LIQAWPEnRTDLHAF	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
N444	SLAVVSLnITSLGLR	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
S457	LRSLKEIsDGDVIIS	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 PhosphositePlus November 2016
C470	ISGNKNLcYANTINW	S-nitrosocysteine	dbPTM 3.0 experimentally verified PTM sites
S511	QVCHALCsPEGCWGP	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
R521	GCWGPEPrDCVSCRN	None	dbSNP All mutations All human mutations
N528	RDCVSCRnVSRGREC	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
N568	ECLPQAMnITCTGRG	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
Y585	NCIQCAHyIDGPHCV	Phosphotyrosine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
N603	PAGVMGEnNTLVWKY	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
N623	VCHLCHPnCTYGCTG	N-Glycosylation	UniProtKB CARBOHYD dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications UniProtKB CARBOHYD
S645	TNGPKIPsIATGMVG	Phosphoserine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
T648	PKIPSIAtGMVGALL	Phosphothreonine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
V674	FMRRRHIvRKRTLRR	None	dbSNP All mutations All human mutations
T678	RHIVRKRtLRRLLQE	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
T693	RELVEPLtPSGEAPN	Phosphothreonine	[Only sites that respond to ischemia] Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Phosphosite Plus Datasets Combined July 3, 2013 Flpin_EGFR_repB Flpin_EGFR_repC Flpin_EGFR UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 Flpin_EGFR UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 DLDsti UniprotKB MOD_RES Dec. 16, 2016 TCGA PNNL: Ovarian phosphoproteomic data Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
S695	LVEPLTPsGEAPNQA	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
K708	QALLRILkETEFKKI	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
E709	ALLRILKeTEFKKIK	None	dbSNP All mutations All human mutations
K713	ILKETEFkKIKVLGS	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K714	LKETEFKkIKVLGSG	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K716	ETEFKKIkVLGSGAF	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
G719	FKKIKVLgSGAFGTV	None	dbSNP pathogenic, from dev server All human mutations dbSNP All mutations Pathogenic mutations Test Set 3 Pathogenic SNPs
S720	KKIKVLGsGAFGTVY	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013
G724	VLGSGAFgTVYKGLW	None	dbSNP All mutations All human mutations
T725	LGSGAFGtVYKGLWI	Phosphothreonine	UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013
Y727	SGAFGTVyKGLWIPE	Phosphotyrosine	Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases PhosphoSite, May 2007 Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013
Y727	SGAFGTVyKGLWIPE	None	Tinti All Peptides
K728	GAFGTVYkGLWIPEG	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K728	GAFGTVYkGLWIPEG	None	Bruce Lab interactions - sites Bruce lab interactions retry with sites Bruce Lab interactions with lower case
E734	YKGLWIPeGEKVKIP	None	dbSNP All mutations All human mutations
K737	LWIPEGEkVKIPVAI	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K739	IPEGEKVkIPVAIKE	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K739	IPEGEKVkIPVAIKE	None	Bruce Lab interactions - sites Bruce lab interactions retry with sites Bruce Lab interactions with lower case
L747	IPVAIKElREATSPK	None	dbSNP All mutations All human mutations
R748	PVAIKELrEATSPKA	None	dbSNP All mutations All human mutations
S752	KELREATsPKANKEI	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K754	LREATSPkANKEILD	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K757	ATSPKANkEILDEAY	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
Y764	KEILDEAyVMASVDN	Phosphotyrosine	PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite Plus Datasets Combined July 3, 2013 Phosphosite, September 2009 B
S768	DEAYVMAsVDNPHVC	Phosphoserine	PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
S768	DEAYVMAsVDNPHVC	None	dbSNP pathogenic, from dev server All human mutations dbSNP All mutations Pathogenic mutations Test Set 3 Pathogenic SNPs
V769	EAYVMASvDNPHVCR	None	dbSNP All mutations All human mutations
Q787	ICLTSTVqLITQLMP	None	dbSNP All mutations All human mutations
T790	TSTVQLItQLMPFGC	None	dbSNP All mutations All human mutations
Y801	PFGCLLDyVREHKDN	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K823	NWCVQIAkGMNYLED	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
Y827	QIAKGMNyLEDRRLV	Phosphotyrosine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
L833	NYLEDRRlVHRDLAA	None	dbSNP All mutations All human mutations
V834	YLEDRRLvHRDLAAR	None	dbSNP All mutations All human mutations
H835	LEDRRLVhRDLAARN	None	dbSNP All mutations All human mutations
L838	RRLVHRDlAARNVLV	None	dbSNP All mutations All human mutations
K846	AARNVLVkTPQHVKI	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
L858	VKITDFGlAKLLGAE	None	dbSNP All mutations All human mutations
K860	ITDFGLAkLLGAEEK	Ubiquitination	A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
L861	TDFGLAKlLGAEEKE	None	dbSNP All mutations All human mutations
K867	KLLGAEEkEYHAEGG	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
Y869	LGAEEKEyHAEGGKV	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines Flpin_EGFR_repC Flpin_EGFR [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSite, May 2007 UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 Flpin_EGFR Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 Wolf-Yadlin Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer HPRD: Human Protein Reference Database Curated Modifications
Y869	LGAEEKEyHAEGGKV	None	Tinti All Peptides
G873	EKEYHAEgGKVPIKW	None	dbSNP All mutations All human mutations
K875	EYHAEGGkVPIKWMA	Ubiquitination	PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016
Y891	ESILHRIyTHQSDVW	Phosphotyrosine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets, January 9, 2015 HPRD: Human Protein Reference Database Curated Modifications
T892	SILHRIYtHQSDVWS	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 PhosphositePlus November 2016
K913	ELMTFGSkPYDGIPA	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
Y915	MTFGSKPyDGIPASE	Phosphotyrosine	dbPTM 3.0 experimentally verified PTM sites HPRD: Human Protein Reference Database Curated Modifications Phospho.ELM v9.0
K929	EISSILEkGERLPQP	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
T940	LPQPPICtIDVYMIM	Phosphothreonine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
Y944	PICTIDVyMIMVKCW	Phosphotyrosine	PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
K960	IDADSRPkFRELIIE	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
R962	ADSRPKFrELIIEFS	None	dbSNP All mutations All human mutations
K970	ELIIEFSkMARDPQR	Ubiquitination	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
Y978	MARDPQRyLVIQGDE	Phosphotyrosine	PhosphoSite, May 2007 UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
Y978	MARDPQRyLVIQGDE	None	Tinti All Peptides
H988	IQGDERMhLPSPTDS	None	dbSNP All mutations All human mutations
S991	DERMHLPsPTDSNFY	Phosphoserine	[Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Flpin_EGFR_repC Flpin_EGFR [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 Flpin_EGFR UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 Wolf-Yadlin DLDsti UniprotKB MOD_RES Dec. 16, 2016 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks TCGA PNNL: Ovarian phosphoproteomic data Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
T993	RMHLPSPtDSNFYRA	Phosphothreonine	Proteogenomics connects somatic mutations to signalling in breast cancer UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
S995	HLPSPTDsNFYRALM	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Flpin_EGFR UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 Flpin_EGFR UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
Y998	SPTDSNFyRALMDEE	Phosphotyrosine	[Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines Flpin_EGFR_repC Flpin_EGFR [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 Flpin_EGFR UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B PhosphoSitePlus Datasets Combined June 15, 2015 Wolf-Yadlin UniprotKB MOD_RES Dec. 16, 2016 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
Y1016	DVVDADEyLIPQQGF	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
Y1016	DVVDADEyLIPQQGF	None	Tinti All Peptides
S1025	IPQQGFFsSPSTSRT	Phosphoserine	UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
S1026	PQQGFFSsPSTSRTP	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
S1028	QGFFSSPsTSRTPLL	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites Phospho.ELM v9.0 Phosphosite, September 2009 March 24 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Phosphosite, September 2009 HPRD: Human Protein Reference Database Curated Modifications Phosphosite, September 2009 B
S1030	FFSSPSTsRTPLLSS	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
T1032	SSPSTSRtPLLSSLS	Phosphothreonine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015
L1034	PSTSRTPlLSSLSAT	None	dbSNP All mutations All human mutations
S1036	TSRTPLLsSLSATSN	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites Phosphosite, September 2009 March 24 Phosphosite, September 2009 HPRD: Human Protein Reference Database Curated Modifications Phosphosite, September 2009 B
S1037	SRTPLLSsLSATSNN	Phosphoserine	UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
S1039	TPLLSSLsATSNNST	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
T1041	LLSSLSAtSNNSTVA	Phosphothreonine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
S1042	LSSLSATsNNSTVAC	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
S1045	LSATSNNsTVACIDR	Phosphoserine	Proteogenomics connects somatic mutations to signalling in breast cancer UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
T1046	SATSNNStVACIDRN	Phosphothreonine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
S1057	IDRNGLQsCPIKEDS	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 TCGA PNNL: Ovarian phosphoproteomic data PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K1061	GLQSCPIkEDSFLQR	Ubiquitination	PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016
K1061	GLQSCPIkEDSFLQR	N6-acetyllysine	acK test PhosphositePlus November 2016
S1064	SCPIKEDsFLQRYSS	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Phosphosite Plus Datasets Combined July 3, 2013 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 TCGA PNNL: Ovarian phosphoproteomic data Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
Y1069	EDSFLQRySSDPTGA	Phosphotyrosine	[Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines Flpin_EGFR_repC Flpin_EGFR [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined January 10, 2014 Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules UniProtKB - MOD_RES Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite, May 2007 UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 Flpin_EGFR UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules PhosphoSitePlus Datasets Combined June 15, 2015 [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules Wolf-Yadlin UniprotKB MOD_RES Dec. 16, 2016 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
Y1069	EDSFLQRySSDPTGA	None	Tinti All Peptides
S1070	DSFLQRYsSDPTGAL	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Flpin_EGFR_repC Flpin_EGFR UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 Wolf-Yadlin UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
S1071	SFLQRYSsDPTGALT	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
T1074	QRYSSDPtGALTEDS	Phosphothreonine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite Plus Datasets Combined July 3, 2013 Phosphosite, September 2009 B
T1078	SDPTGALtEDSIDDT	Phosphothreonine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phospho.ELM v9.0
S1081	TGALTEDsIDDTFLP	Phosphoserine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phosphosite, September 2009 B Phospho.ELM v9.0 PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
T1085	TEDSIDDtFLPVPEY	Phosphothreonine	Proteogenomics connects somatic mutations to signalling in breast cancer dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
Y1092	TFLPVPEyINQSVPK	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 UniprotKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines Flpin_EGFR UniProtKB - MOD_RES [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified [Default Assignments] Effects of HER2 overexpression on cell signaling networks governing proliferation and migration PhosphoSite Plus Datasets Combined January 10, 2014 Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules UniProtKB - MOD_RES Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B Proteogenomics connects somatic mutations to signalling in breast cancer [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules PhosphoSitePlus Datasets Combined June 15, 2015 [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules Wolf-Yadlin UniprotKB MOD_RES Dec. 16, 2016 Effects of HER2 overexpression on cell signaling networks governing proliferation and migration Phosphosite, September 2009 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer HPRD: Human Protein Reference Database Curated Modifications
Y1092	TFLPVPEyINQSVPK	None	Test for Protocols Paper Tinti All Peptides
S1096	VPEYINQsVPKRPAG	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
S1104	VPKRPAGsVQNPVYH	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
Y1110	GSVQNPVyHNQPLNP	Phosphotyrosine	PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines Flpin_EGFR_repC Flpin_EGFR UniProtKB - MOD_RES [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified LIMSt PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 Flpin_EGFR UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 limST Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
Y1110	GSVQNPVyHNQPLNP	None	Roman_set1 Tinti All Peptides
S1120	QPLNPAPsRDPHYQD	Phosphoserine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013
Y1125	APSRDPHyQDPHSTA	Phosphotyrosine	PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
Y1125	APSRDPHyQDPHSTA	None	Tinti All Peptides
S1130	PHYQDPHsTAVGNPE	Phosphoserine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
T1131	HYQDPHStAVGNPEY	Phosphothreonine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
Y1138	TAVGNPEyLNTVQPT	Phosphotyrosine	Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases PhosphoSite, May 2007 UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 HPRD: Human Protein Reference Database Curated Modifications Phosphosite Plus Datasets Combined July 3, 2013 Phosphosite, September 2009 B
Y1138	TAVGNPEyLNTVQPT	None	Roman_set1 Tinti All Peptides
T1141	GNPEYLNtVQPTCVN	Phosphothreonine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
T1145	YLNTVQPtCVNSTFD	Phosphothreonine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
T1150	QPTCVNStFDSPAHW	Phosphothreonine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
S1153	CVNSTFDsPAHWAQK	Phosphoserine	PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
S1162	AHWAQKGsHQISLDN	Phosphoserine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite Plus Datasets Combined July 3, 2013 Phosphosite, September 2009 B
S1166	QKGSHQIsLDNPDYQ	Phosphoserine	[Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks [Only sites that respond to ischemia] Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite Plus Datasets Combined January 10, 2014 UniProtKB - MOD_RES Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 UniprotKB MOD_RES Dec. 16, 2016 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks TCGA PNNL: Ovarian phosphoproteomic data Phosphosite, September 2009 UniprotKB - MOD_RES HPRD: Human Protein Reference Database Curated Modifications
Y1172	ISLDNPDyQQDFFPK	Phosphotyrosine	[Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels UniprotKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines Flpin_EGFR_repC TCGA PNNL: Ovarian phosphoproteomic data phosphotyrosine subset Flpin_EGFR [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES GI lookup SUPP T1-27 [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks [Default Assignments] Effects of HER2 overexpression on cell signaling networks governing proliferation and migration PhosphoSite Plus Datasets Combined January 10, 2014 Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules UniProtKB - MOD_RES Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 Flpin_EGFR UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B Proteogenomics connects somatic mutations to signalling in breast cancer [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules PhosphoSitePlus Datasets Combined June 15, 2015 [Default Assignments] Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules Wolf-Yadlin UniprotKB MOD_RES Dec. 16, 2016 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks TCGA PNNL: Ovarian phosphoproteomic data Effects of HER2 overexpression on cell signaling networks governing proliferation and migration Waziri GBM Samples Phosphosite, September 2009 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer HPRD: Human Protein Reference Database Curated Modifications
Y1172	ISLDNPDyQQDFFPK	None	Test for Protocols Paper Roman_set1 Tinti All Peptides
K1179	YQQDFFPkEAKPNGI	N6-acetyllysine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K1182	DFFPKEAkPNGIFKG	N6-acetyllysine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K1188	AKPNGIFkGSTAENA	N6-acetyllysine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 acK test Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite Plus Datasets Combined July 3, 2013
K1188	AKPNGIFkGSTAENA	Methylation	PhosphositePlus November 2016
S1190	PNGIFKGsTAENAEY	Phosphoserine	PhosphoSite, May 2007 dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite, September 2009 B Phosphosite Plus Datasets Combined July 3, 2013 Phospho.ELM v9.0
T1191	NGIFKGStAENAEYL	Phosphothreonine	dbPTM 3.0 experimentally verified PTM sites PhosphoSitePlus Datasets Combined June 15, 2015 PhosphositePlus November 2016 PhosphoSitePlus Datasets Combined June 2016 Phosphosite Plus Datasets Combined December 3, 2012 Phosphosite, September 2009 March 24 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 Phosphosite, September 2009 Phosphosite Plus Datasets Combined July 3, 2013 Phosphosite, September 2009 B
Y1197	STAENAEyLRVAPQS	Phosphotyrosine	[Miscleavages Removed][Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks PhosphoSitePlus Datasets Combined June 2016 UniProtKB - MOD_RES [pY only] Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSite Plus Datasets, January 9, 2015 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels UniprotKB - MOD_RES Phosphosite Plus Datasets Combined July 3, 2013 Ultra-deep tyrosine phosphoproteomics enabled by a phosphotyrosine superbinder Flpin_EGFR_repB Signaling networks assembled by oncogenic EGFR and c-MET: Profiling of lung cancer cell lines Flpin_EGFR_repC Flpin_EGFR [Miscleavages removed] [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks UniProtKB - MOD_RES [Cell lines specified] Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer, with cell lines specified [Default Assignments Test] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks [Default Assignments] Effects of HER2 overexpression on cell signaling networks governing proliferation and migration PhosphoSite Plus Datasets Combined January 10, 2014 Guolin_H4006ER UniProtKB - MOD_RES Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases PhosphoSite, May 2007 UniProtKB - MOD_RES UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 test Phosphosite, September 2009 March 24 Flpin_EGFR UniProtKB - MOD_RES UniProtKB KMN Phospho.ELM v9.0 Phosphosite, September 2009 B Proteogenomics connects somatic mutations to signalling in breast cancer PhosphoSitePlus Datasets Combined June 15, 2015 Wolf-Yadlin UniprotKB MOD_RES Dec. 16, 2016 [Default Assignments] Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks Effects of HER2 overexpression on cell signaling networks governing proliferation and migration Waziri GBM Samples Phosphosite, September 2009 Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer HPRD: Human Protein Reference Database Curated Modifications
Y1197	STAENAEyLRVAPQS	None	Test for Protocols Paper Tinti All Peptides
R1199	AENAEYLrVAPQSSE	Omega-N-methylated arginine	UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES UniProtKB - MOD_RES
R1199	AENAEYLrVAPQSSE	Omega-N-methylarginine	UniProtKB - MOD_RES dbPTM 3.0 experimentally verified PTM sites UniProtKB - MOD_RES UniProtKB - MOD_RES UniprotKB MOD_RES Dec. 16, 2016 UniprotKB - MOD_RES UniProtKB - MOD_RES UniProtKB KMN
A1210	QSSEFIGa	None	dbSNP All mutations All human mutations