Interferon regulatory factor 6

Site	Peptide	Modification	Experiment
A2	MaLHPRRVR	None	Pathogenic SNPs dbSNP All mutations dbSNP pathogenic, from dev server Test Set 3 All human mutations Pathogenic mutations
R6	MALHPrRVRLKPW	None	Pathogenic SNPs dbSNP All mutations dbSNP pathogenic, from dev server Test Set 3 All human mutations Pathogenic mutations
A16	RLKPWLVaQVDSGLY	None	dbSNP All mutations All human mutations
V18	KPWLVAQvDSGLYPG	None	dbSNP All mutations All human mutations
L22	VAQVDSGlYPGLIWL	None	dbSNP All mutations All human mutations
S33	LIWLHRDsKRFQIPW	Phosphoserine	Proteogenomics connects somatic mutations to signalling in breast cancer
P39	DSKRFQIpWKHATRH	None	dbSNP All mutations All human mutations
R45	IPWKHATrHSPQQEE	None	Pathogenic SNPs dbSNP All mutations dbSNP pathogenic, from dev server Test Set 3 All human mutations Pathogenic mutations
S47	WKHATRHsPQQEEEN	Phosphoserine	Proteogenomics connects somatic mutations to signalling in breast cancer Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer. Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels TCGA PNNL: Ovarian phosphoproteomic data PhosphoSitePlus Datasets Combined June 2016
W60	ENTIFKAwAVETGKY	None	dbSNP All mutations All human mutations
A61	NTIFKAWaVETGKYQ	None	dbSNP All mutations All human mutations
T64	FKAWAVEtGKYQEGV	None	dbSNP All mutations All human mutations
K66	AWAVETGkYQEGVDD	Ubiquitination	Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSitePlus Datasets Combined June 15, 2015
K66	AWAVETGkYQEGVDD	None	dbSNP All mutations All human mutations
G70	ETGKYQEgVDDPDPA	None	dbSNP All mutations All human mutations
P76	EGVDDPDpAKWKAQL	None	dbSNP All mutations All human mutations
Q82	DPAKWKAqLRCALNK	None	dbSNP All mutations All human mutations
R84	AKWKAQLrCALNKSR	None	dbSNP All mutations All human mutations
N88	AQLRCALnKSREFNL	None	dbSNP All mutations All human mutations
K89	QLRCALNkSREFNLM	None	dbSNP All mutations All human mutations
S90	LRCALNKsREFNLMY	None	dbSNP All mutations All human mutations
S90	LRCALNKsREFNLMY	Phosphoserine	Proteogenomics connects somatic mutations to signalling in breast cancer
Y97	SREFNLMyDGTKEVP	Phosphotyrosine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
D98	REFNLMYdGTKEVPM	None	dbSNP All mutations All human mutations
T100	FNLMYDGtKEVPMNP	None	dbSNP All mutations All human mutations
S122	DIPQPQGsIINPGST	Phosphoserine	Proteogenomics connects somatic mutations to signalling in breast cancer
S128	GSIINPGsTGSAPWD	Phosphoserine	Proteogenomics connects somatic mutations to signalling in breast cancer
S131	INPGSTGsAPWDEKD	Phosphoserine	Proteogenomics connects somatic mutations to signalling in breast cancer
R250	VSNPQGCrLFYGDLG	None	dbSNP All mutations All human mutations
L251	SNPQGCRlFYGDLGP	None	dbSNP All mutations All human mutations
Q273	FGPVSLEqVKFPGPE	None	dbSNP All mutations All human mutations
V274	GPVSLEQvKFPGPEH	None	dbSNP All mutations All human mutations
L294	QKLFTSKlLDVMDRG	None	dbSNP All mutations All human mutations
V297	FTSKLLDvMDRGLIL	None	dbSNP All mutations All human mutations
Y312	EVSGHAIyAIRLCQC	Phosphotyrosine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
K320	AIRLCQCkVYWSGPC	None	dbSNP All mutations All human mutations
V321	IRLCQCKvYWSGPCA	None	dbSNP All mutations All human mutations
G325	QCKVYWSgPCAPSLV	None	dbSNP All mutations All human mutations
R339	VAPNLIErQKKVKLF	None	dbSNP All mutations All human mutations
L345	ERQKKVKlFCLETFL	None	dbSNP All mutations All human mutations
C347	QKKVKLFcLETFLSD	None	dbSNP All mutations All human mutations
E349	KVKLFCLeTFLSDLI	None	dbSNP All mutations All human mutations
F369	QIEKQPPfEIYLCFG	None	dbSNP All mutations All human mutations
C374	PPFEIYLcFGEEWPD	None	dbSNP All mutations All human mutations
K388	DGKPLERkLILVQVI	None	dbSNP All mutations All human mutations
P396	LILVQVIpVVARMIY	None	dbSNP All mutations All human mutations
R400	QVIPVVArMIYEMFS	None	Pathogenic SNPs dbSNP All mutations dbSNP pathogenic, from dev server Test Set 3 All human mutations Pathogenic mutations
S407	RMIYEMFsGDFTRSF	Phosphoserine	Proteogenomics connects somatic mutations to signalling in breast cancer
S413	FSGDFTRsFDSGSVR	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation Proteogenomics connects somatic mutations to signalling in breast cancer PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
S416	DFTRSFDsGSVRLQI	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation Proteogenomics connects somatic mutations to signalling in breast cancer PhosphositePlus November 2016 Phosphosite Plus Datasets Combined December 3, 2012 dbPTM 3.0 experimentally verified PTM sites PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSite Plus Datasets Combined July 11, 2014 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
S424	GSVRLQIsTPDIKDN	Phosphoserine	System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation Proteogenomics connects somatic mutations to signalling in breast cancer PhosphositePlus November 2016 Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels PhosphoSite Plus Datasets, January 9, 2015 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015
S424	GSVRLQIsTPDIKDN	None	dbSNP All mutations All human mutations
D430	ISTPDIKdNIVAQLK	None	dbSNP All mutations All human mutations
S457	QPMQPTPsMQLPPAL	Phosphoserine	Phosphosite Plus Datasets Combined July 3, 2013 PhosphositePlus November 2016 PhosphoSite Plus Datasets, January 9, 2015 PhosphoSite Plus Datasets Combined January 10, 2014 PhosphoSitePlus Datasets Combined June 2016 PhosphoSitePlus Datasets Combined June 15, 2015